commands.sh

sh5util

linux

Merge HDF5 files produced by the `sacct_gather_profile` plugin.

More info →

Options (6)

-j, --jobsboolean

Merge HDF5 files produced on each allocated node for the specified job or step

Example: sh5util {{[-j|--jobs]}} {{job_id|job_id.step_id}}
-E, --extractboolean

Extract one or more data series from a merged job file

Example: sh5util {{[-j|--jobs]}} {{job_id|job_id.step_id}} {{[-E|--extract]}} {{[-i|--input]}} {{path/to/file.h5}} {{[-s|--series]}} {{Energy|Filesystem|Network|Task}}
-i, --inputboolean

Extract one or more data series from a merged job file

Example: sh5util {{[-j|--jobs]}} {{job_id|job_id.step_id}} {{[-E|--extract]}} {{[-i|--input]}} {{path/to/file.h5}} {{[-s|--series]}} {{Energy|Filesystem|Network|Task}}
-s, --seriesboolean

Extract one or more data series from a merged job file

Example: sh5util {{[-j|--jobs]}} {{job_id|job_id.step_id}} {{[-E|--extract]}} {{[-i|--input]}} {{path/to/file.h5}} {{[-s|--series]}} {{Energy|Filesystem|Network|Task}}
-I, --item-extractboolean

Extract one data item from all nodes in a merged job file

Example: sh5util {{[-j|--jobs]}} {{job_id|job_id.step_id}} {{[-I|--item-extract]}} {{[-s|--series]}} {{Energy|Filesystem|Network|Task}} {{[-d|--data]}} {{data_item}}
-d, --databoolean

Extract one data item from all nodes in a merged job file

Example: sh5util {{[-j|--jobs]}} {{job_id|job_id.step_id}} {{[-I|--item-extract]}} {{[-s|--series]}} {{Energy|Filesystem|Network|Task}} {{[-d|--data]}} {{data_item}}

Examples (3)

Merge HDF5 files produced on each allocated node for the specified job or step

sh5util [-j|--jobs] job_id|job_id.step_id

Extract one or more data series from a merged job file

sh5util [-j|--jobs] job_id|job_id.step_id [-E|--extract] [-i|--input] path/to/file.h5 [-s|--series] Energy|Filesystem|Network|Task

Extract one data item from all nodes in a merged job file

sh5util [-j|--jobs] job_id|job_id.step_id [-I|--item-extract] [-s|--series] Energy|Filesystem|Network|Task [-d|--data] data_item
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